Friday, 26 July 2013

Migration of Nanoparticles from Textiles

 








More realistic exposure scenario for wearing Ag- and TiO2-engineered nanoparticle-containing textiles
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Self-Assembled Wheels

Self-Assembled Wheels








Two different terpyridine ligands self-assemble when mixed with zinc(II) ions to form 2D or 3D spoked wheels
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Titanium Dioxide for Sensitive Immunosensors

 








Titanium dioxide nanolayers as electrodes and titanium dioxide nanoparticles for enhanced immunosensing using electrochemiluminescence
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Monday, 22 July 2013

Fries Rearrangement Mechanism



The Fries rearrangement proceeds through ionic intermediates. The reaction depends on the structure of the substrates and the reaction conditions. 

The scheme depicts the formation of an ortho-acylated phenol from a substituted phenolic ester in the presence of aluminium trihalide catalyst. The photo Fries rearrangement mechanism proceeds through Radical intermediates.




The Fries rearrangement, named for the German chemist Karl Theophil Fries, is a rearrangement reaction of a phenyl ester to a hydroxy aryl ketone by catalysis of Lewis acids.[1][2][3][4]
It involves migration of an acyl group of phenyl ester to benzene ring. The reaction is ortho and para selective and one of the two products can be favoured by changing reaction conditions, such as temperature and solvent.

Mechanism

Despite many efforts a definitive reaction mechanism for the Fries rearrangement is not available. Evidence for inter- and intramolecular mechanisms have been obtained by so-called cross-experiments with mixed reactants. Reaction progress is not dependent on solvent or substrate. A widely accepted mechanism involves a carbocation intermediate.
The Fries rearrangement
In the first reaction step a Lewis acid for instance aluminium chloride AlCl
3
co-ordinates to the carbonyl oxygen atom of the acyl group. This oxygen atom is more electron rich than the phenolic oxygen atom and is the preferred Lewis base. This interaction polarizes the bond between the acyl residue and the phenolic oxygen atom and the aluminium chloride group rearranges to the phenolic oxygen atom. This generates a free acylium carbocation which reacts in a classical electrophilic aromatic substitution with the aromatic ring. The abstracted proton is released as hydrochloric acid where the chlorine is derived from aluminium chloride. The orientation of the substitution reaction is temperature dependent. A low reaction temperature favors para substitution and with high temperatures the ortho product prevails. Formation of the ortho product is also favoured in non-polar solvents; as the solvent polarity increases, the ratio of the para product also increases.[5]

Scope

Phenols react to esters but do not react to hydroxyarylketones with acylhalogen compounds under Friedel-Crafts acylation reaction conditions and therefore this reaction is of industrial importance for the synthesis of hydroxyarylketones which are important intermediates for several pharmaceutics such as paracetamol and salbutamol. As an alternative to aluminium chloride, other Lewis acids such as boron trifluoride and bismuth triflate or strong protic acids such as hydrogen fluoride and methanesulfonic acid can also be used. In order to avoid the use of these corrosive and environmentally unfriendly catalysts altogether research into alternative heterogeneous catalysts is actively pursued.

Limits

In all instances only esters can be used with stable acyl components that can withstand the harsh conditions of the Fries rearrangement. If the aromatic or the acyl component is heavily substituted then the chemical yield will drop due to steric constraints. Deactivating meta-directing groups on the benzene group will also have an adverse effect as can be expected for a Friedel–Crafts acylation.

Photo-Fries rearrangement

In addition to the ordinary thermal phenyl ester reaction a so-called photochemical Photo-Fries rearrangement exists[6] that involves a radical reaction mechanism. This reaction is also possible with deactivating substituents on the aromatic group. Because the yields are low this procedure is not used in commercial production. However, photo-Fries rearrangement may occur naturally, for example when a plastic bottle made of polyethylene terephthalate (PET) is exposed to the sun, particular to UV light at a wavelength of about 310 nm, if the plastic has been heated to 40 degrees Celsius or above (as might occur in a car with windows closed on a hot summer day). In this case, photolysis of the ester groups would lead to leaching of phthalate from the plastic.[7]
Photo Fries rearrangement

Anionic Fries rearrangment

In addition to Lewis acid and photo-catalysed Fries rearrangements, there also exists an anionic Fries rearrangement. In this reaction, the aryl ester undergoes ortho-metallation with a strong base, which then rearranges in a nucleophilic attack mechanism.

  1.  Fries, K. ; Finck, G. (1908). "Über Homologe des Cumaranons und ihre Abkömmlinge". Chemische Berichte 41 (3): 4271–4284. doi:10.1002/cber.190804103146.
  2.  Fries, K.; Pfaffendorf, W. (1910). "Über ein Kondensationsprodukt des Cumaranons und seine Umwandlung in Oxindirubin". Chemische Berichte 43 (1): 212–219. doi:10.1002/cber.19100430131.
  3.  March, J. Advanced Organic Chemistry, 3rd Ed.; John Wiley & Sons: Chichester, 1985; S. 499ff.
  4.  Blatt, A. H. Org. React. 1942, 1.
  5.  Kürti, László; Czakó, Barbara (2005). Strategic Applications of Named Reactions in Organic Synthesis: Background and Detailed Mechanisms. Elsevier Academic Press. p. 181. ISBN 0123694833.
  6.  Bellus, D. Advances in Photochemistry; John Wiley & Sons: Chichester, 1971; Vol. 8, 109–159.
  7.  Norma Searle, "Environmental effects on polymeric materials," pp. 313–358, in Plastics and the Environment, edited by Anthony Andrade, Wiley, 2003.

Photo Fries rearrangement

 


Sunday, 21 July 2013

Enantioselective Michael Addition


Coming on the heels of the very nice combined computational/experimental study of the enantioselective Strecker reaction by Jacobsen , there’s this JACS communication that really disappoints in its use of computational chemistry. Cobb uses yet another chiral thiourea to produce the enantioselective intramolecular Michael addition of nitronoates (Reaction1).1 The reaction goes with excellent diastereoselectivity and eneatioselectivity, and can even be done with a substrate to produce three chiral centers. This is very nice synthetic chemistry.
Reaction 1.
dr >19:1
ee 95%
The lack of reactivity of the Z ester suggested that the thiourea must associate with both the nitro group and the ester carbonyl. The authors provide a B3LYP/3-21G complex of thiourea with a simple nitroester (once again without providing coordinates in the supporting materials!) to demonstrate this sort of association. But this single structure, at this very low computational level, with these simplified reagents, and lacking solvent (see Rzepa’s comment) really makes one wonder just what value this computation provides. It also goes to demonstrate just how much effort Jacobsen went through to provide substantive computational support for his proposed mechanism of action.

References

(1) Nodes, W. J.; Nutt, D. R.; Chippindale, A. M.; Cobb, A. J. A., "Enantioselective Intramolecular Michael Addition of Nitronates onto Conjugated Esters: Access to Cyclic γ-Amino Acids with up to Three Stereocenters," J. Am. Chem. Soc. 2009, 131, 16016-16017, DOI: 10.1021/ja9070915

Novel cyclophanes: Out-of-Plane Bending and Aromaticity


The novel cyclophanes 1 and 2 have now been synthesized.1 An interesting question is whether the bent pyrenes portion of the two molecules remains aromatic. The bending angles is 93.8° in 1and 95.8° in 2. This distortion is readily apparent in Figure 1, which presents their B3LYP/6-311G(d,p) optimized geometries. NICS computations were used to assess the aromaticity of the pyrene portion. The central rings of pyrene have NICS(0) = -4.4 ppm. The corresponding values in1 and 2 are -4.5 ppm. The apical rings of pyrene have NICS(0)= -11.9 ppm, while the value is -11.1 ppm in 1 and -11.0 ppm in 2. These calculations indicate that the molecule retains much of the aromaticity of the parent pyrene despite the significant out-of-plane distortions.
Figure 1. B3LYP/6-311G(d,p) optimized geometries of 1 and 2.1

1

2

References

(1) Zhang, B.; Manning, G. P.; Dobrowolski, M. A.; Cyranski, M. K.; Bodwell, G. J., "Nonplanar Aromatic Compounds. 9. Synthesis, Structure, and Aromaticity of 1:2,13:14-Dibenzo[2]paracyclo[2](2,7)-pyrenophane-1,13-diene," Org. Lett., 2008, 10, 273-276, DOI: 10.1021/ol702703b.

Friday, 19 July 2013

Do You Remember Darzen condensation Reaction




The Darzens reaction (also known as the Darzens condensation or glycidic ester condensation) is the chemical reaction of a ketone or aldehyde with an α-haloester in the presence of base to form an α,β-epoxy ester, also called a "glycidic ester".[1][2] This reaction was discovered by the organic chemist Auguste George Darzens in 1904.[3]
Darzens reaction overview.png


The reaction process begins when a strong base is used to form a carbanion at the halogenated position. Because of the ester, this carbanion is a resonance-stabilized enolate, which makes it relatively easy to form. This nucleophilic structure attacks another carbonyl component, forming a new carbon–carbon bond. These first two steps are similar to a base-catalyzed aldol reaction. The oxygen anion in this aldol-like product then does an intramolecular SN2 attack on the formerly-nucleophilic halide-bearing position, displacing the halide to form an epoxide.[4] This reaction sequence is thus a condensation reaction, since there is a net loss of HCl when the two reactant molecules join.Reaction mechanism

Darzensepoxide.png
The primary role of the ester is to enable the initial deprotonation to occur, and other carbonyl functional groups can be used instead. If the starting material is an α-halo amide, the product is an α,β-epoxy amide.[5] If an α-halo ketone is used, the product is an α,β-epoxy ketone.[4]
Any sufficiently strong base can be used for the initial deprotonation. However, if the starting material is an ester, the alkoxide corresponding to the ester side-chain is commonly in order to prevent complications due to potential acyl exchange side reactions.

Stereochemistry

Depending on the specific structures involved, the epoxide may exist in cis and trans forms. A specific reaction may give only cis, only trans, or a mixture of the two. The specific stereochemical outcome of the reaction is affected by several aspects of the intermediate steps in the sequence.
The initial stereochemistry of the reaction sequence is established in the step where the carbanion attacks the carbonyl. Two sp3 (tetrahedral) carbons are created at this stage, which allows two different diastereomeric possibilities of the halohydrin intermediate. The most likely result is due to chemical kinetics: whichever product is easier and faster to form will be the major product of this reaction. The subsequent SN2 reaction step proceeds with stereochemical inversion, so the cis or trans form of the epoxide is controlled by the kinetics of an intermediate step. Alternately, the halohydrin can epimerize due to the basic nature of the reaction conditions prior to the SN2 reaction. In this case, the initially formed diastereomer can convert to a different one. This is an equilibrium process, so the cis or trans form of the epoxide is controlled by chemical thermodynamics--the product resulting from the more stable diastereomer, regardless of which one was the kinetic result.[5]

Alternative reactions

Glycidic esters can also be obtained via nucleophilic epoxidation of an α,β-unsaturated ester, but that approach requires synthesis of the alkene substrate first whereas the Darzens condensation allows formation of the carbon–carbon connectivity and epoxide ring in a single reaction.

Subsequent reactions

The product of the Darzens reaction can be reacted further to form various types of compounds. Hydrolysis of the ester can lead to decarboxylation, which triggers a rearrangement of the epoxide into a carbonyl (4). Alternately, other epoxide rearrangements can be induced to form other structures.
The Darzens reaction

References

  1.  Darzens, G. (1905). Compt. Rend. 141: 766.
  2.  Darzens, G. (1906). Compt. Rend. 142: 214.
  3.  Darzens, G. (1904). Compt. Rend. 139: 1214.
  4. Jie Jack Li (2006). "Darzens glycidic ester condensation". Name Reactions (3rd. expanded ed.). Springer-Verlag. pp. 183–184. doi:10.1007/3-540-30031-7.
  5. Tung, C. C.; Speziale, A. J.; Frazier, H. W. (1963). "The Darzens Condensation. II. Reaction of Chloroacetamides with Aromatic Aldehydes". The Journal of Organic Chemistry 28 (6): 1514. doi:10.1021/jo01041a018. edit
Review articles

  • Newman, M. S.; Magerlein, B. J. (1949). Org. React. 5: 413.
  • Ballester, M. (1955). "Mechanisms of The Darzens and Related Condensations Manuel Ballester". Chem. Rev. 55 (2): 283. doi:10.1021/cr50002a002.
  • Rosen, T. (1991). Comp. Org. Syn. 2: 409–439.